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Allopatric evolution in rousettine fruit bats: from population and landscape genetics to phylogeography
Stříbná, Tereza
Population structure, biogeography and phylogenetic relationships of the fruit bat genus Rousettus have been studied in Africa and adjacent regions. The current population patterns of rousettine fruit bats in the Old World are influenced by several environmental attributes, namely the topography, climate and land cover. These variables are mirrored in fruit bat plesiomorphies related to the ecological niche of tropical flying frugivore, as well as apomorphies of rousettines including echolocation ability, roosting in caves and dispersal capacity in open landscapes with discontinuous tree cover. Phylogenetic relationships among species and subspecies of the genus have been indicated and confronted with the existing colonization scenarios. Insular populations (including habitat islands within desert oases) show frequent genetic differentiation from their mainland relatives suggesting successful founder events after traversing stretches of unsuitable habitats. Genetic differentiation evolving in less distant islands suggests involving behavioural mechanisms maintaining cohesion of isolated demes as site fidelity and natal habitat-biased dispersal. In sub-Saharan mainland Africa within the large range reaching from the southern border of Sahara to Cape Peninsula, Rousettus populations share a...
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Allopatric evolution in rousettine fruit bats: from population and landscape genetics to phylogeography
Stříbná, Tereza ; Hulva, Pavel (advisor) ; Bryja, Josef (referee) ; Vallo, Peter (referee)
Population structure, biogeography and phylogenetic relationships of the fruit bat genus Rousettus have been studied in Africa and adjacent regions. The current population patterns of rousettine fruit bats in the Old World are influenced by several environmental attributes, namely the topography, climate and land cover. These variables are mirrored in fruit bat plesiomorphies related to the ecological niche of tropical flying frugivore, as well as apomorphies of rousettines including echolocation ability, roosting in caves and dispersal capacity in open landscapes with discontinuous tree cover. Phylogenetic relationships among species and subspecies of the genus have been indicated and confronted with the existing colonization scenarios. Insular populations (including habitat islands within desert oases) show frequent genetic differentiation from their mainland relatives suggesting successful founder events after traversing stretches of unsuitable habitats. Genetic differentiation evolving in less distant islands suggests involving behavioural mechanisms maintaining cohesion of isolated demes as site fidelity and natal habitat-biased dispersal. In sub-Saharan mainland Africa within the large range reaching from the southern border of Sahara to Cape Peninsula, Rousettus populations share a...
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Allopatric evolution in rousettine fruit bats: from population and landscape genetics to phylogeography
Stříbná, Tereza ; Hulva, Pavel (advisor) ; Bryja, Josef (referee) ; Vallo, Peter (referee)
Population structure, biogeography and phylogenetic relationships of the fruit bat genus Rousettus have been studied in Africa and adjacent regions. The current population patterns of rousettine fruit bats in the Old World are influenced by several environmental attributes, namely the topography, climate and land cover. These variables are mirrored in fruit bat plesiomorphies related to the ecological niche of tropical flying frugivore, as well as apomorphies of rousettines including echolocation ability, roosting in caves and dispersal capacity in open landscapes with discontinuous tree cover. Phylogenetic relationships among species and subspecies of the genus have been indicated and confronted with the existing colonization scenarios. Insular populations (including habitat islands within desert oases) show frequent genetic differentiation from their mainland relatives suggesting successful founder events after traversing stretches of unsuitable habitats. Genetic differentiation evolving in less distant islands suggests involving behavioural mechanisms maintaining cohesion of isolated demes as site fidelity and natal habitat-biased dispersal. In sub-Saharan mainland Africa within the large range reaching from the southern border of Sahara to Cape Peninsula, Rousettus populations share a...
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Genetic Diversity of Semi-captive Population of Western Derby Eland (Taurotragus derbianus derbianus) in Senegal and Phylogenetical Relationships between Western Derby Eland (T. d. derbianus) and Eastern Giant Eland (T. d. gigas)
Zemanová, Hana ; Lukešová, Daniela (advisor) ; Jarmila, Jarmila (referee)
Representatives of family Bovidae are subjects of many studies concerning with their phylogeny, phylogeography, time of divergence or genetic diversity. Taxonomy is solved by comparison of morphological characteristics or by genetic approaches, genetic diversity could be solved by pedigree or by genetic analyses too. Tragelaphinae number nine species of two genera, Tragelaphus sp. and Taurotragus sp. The antelopes of the genus Taurotragus (T. derbianus and T. oryx) belong to the largest antelopes of the world. Derby eland (Taurotragus derbianus) has two subspecies, Western Derby eland (T. d. derbianus) and Eastern Giant eland (T. d. gigas), which are distinguished on the basis of morphological characteristics. Western subspecies (T. d. derbianus) is classified as critically endangered. There lives the only population in Niokolo Koba National Park in Senegal, which numbers fewer than 200 individuals. For the conservation, the semi-captive breeding programme has been established in 2000. It was created by six founders (one male and five females), which are presumed to be non-related. The population within this programme had 95 living individuals in 2013, living in seven herds in Bandia and Fathala reserves in Senegal. The population is under breeding management, which efforts to minimize kinship of the individuals. Studbook was established for the Western Derby eland (T. d. derbianus) in 2008 and is published annually. It acts about small population with low number of founders and no gene flow, which is threatened by inbreeding and genetic drift. Genetic diversity of the population was evaluated by means of microsatellite markers and the results were compared with the results of pedigree analysis. Pedigree analysis showed the highest genetic diversity in the generation of founders (FOUNDERS). It decreased in the generation of founders' offspring (OFFSPRING 1; born in season 2007/2008), due to the fact, that the only male took part in the reproduction. And it increased again in the generation of offspring of founders' offspring (OFFSPRING 2; born in the season 2009/2010), because more individuals were included into the reproduction. Fifteen individuals and five polymorphic microsatellite loci (from the total number of 13 tested loci) were chosen for the genetic study. The parameters of genetic diversity (HE and HO, Ar and deviations from Hardy-Weinberg equilibrium, and FIS and FST) were evaluated. Not any deviations from Hardy-Weinberg equilibrium were found out. The results of genetic analysis confirmed the highest genetic diversity in the population of founders (Ar = 2.79; HE = 0.664; HO = 0.750; FIS = --0.154). In both generations of offspring values of allelic richness and observed and expected heterozygosity decreased (Ar = 2.15; HO = 0.580; HE = 0.586 in OFFSPRING 1 and Ar = 2.14; HO = 0.370; HE = 0.480 in OFFSPRING 2). Contrary to the results of pedigree analysis, there was not been observed any improvement in OFFSPRING 2. The resultant values of genetic diversity parameters were quite satisfactory, despite of the low number of founders and mating of related individuals.
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